{"id":345,"date":"2024-04-25T19:56:34","date_gmt":"2024-04-25T19:56:34","guid":{"rendered":"https:\/\/winterdev.cc\/nwgc-dev\/?page_id=345"},"modified":"2024-04-25T19:56:34","modified_gmt":"2024-04-25T19:56:34","slug":"10x-scrnaseq-and-atacseq","status":"publish","type":"page","link":"https:\/\/nwgc.gs.washington.edu\/wordpress\/tech-platforms\/sample-processing\/short-read\/10x-scrnaseq-and-atacseq\/","title":{"rendered":"10x scRNAseq and ATACseq"},"content":{"rendered":"<figure class=\"wp-block-table\">\n<table class=\"has-dusty-sun-background-color has-background\">\n<tbody>\n<tr>\n<td><strong>Product<\/strong><\/td>\n<td><strong>Utility<\/strong><\/td>\n<td><strong>Specifications<\/strong><\/td>\n<\/tr>\n<tr>\n<td><strong>10X Single Cell Multiome ATAC + Gene Expression<\/strong><\/td>\n<td>Multiply your power of discovery with combined epigenomic and gene expression profiling using the assay for transposase accessible chromatin (ATAC) to identify regions of open chromatin alongside RNA-seq. Gain deeper insights into cell types and states with linked transcriptional and epigenomic analyses. Understand gene regulatory networks by linking open chromatin regions with gene expression profiles at single cell resolution. Easily interpret epigenetic profiles with key expression markers.<\/td>\n<td>\u2022 Efficiently partition 500\u201310,000 nuclei per channel, for up to 80,000 nuclei per run &nbsp;\u2022 Scalable; run up to 8 samples in parallel &nbsp;\u2022 High nuclei capture rates of up to 65% &nbsp;\u2022 Low multiplet rates of 0.8% per 1,000 cells<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/figure>\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"946\" height=\"316\" src=\"https:\/\/winterdev.cc\/nwgc-dev\/wp-content\/uploads\/2024\/06\/image-2.png\" alt=\"\" class=\"wp-image-844\" srcset=\"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-content\/uploads\/2024\/06\/image-2.png 946w, https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-content\/uploads\/2024\/06\/image-2-300x100.png 300w, https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-content\/uploads\/2024\/06\/image-2-768x257.png 768w, https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-content\/uploads\/2024\/06\/image-2-375x125.png 375w\" sizes=\"auto, 100vw\" \/><\/figure>\n<h5 class=\"wp-block-heading\">Efficient and robust workflow: Generate two complementary libraries from the same sample.<\/h5>\n<p><a href=\"https:\/\/www.10xgenomics.com\/products\/single-cell-multiome-atac-plus-gene-expression\">Single Cell Multiome<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Product Utility Specifications 10X Single Cell Multiome ATAC + Gene Expression Multiply your power of discovery with combined epigenomic and gene expression profiling using the assay for transposase accessible chromatin (ATAC) to identify regions of open chromatin alongside RNA-seq. Gain deeper insights into cell types and states with linked transcriptional and epigenomic analyses. Understand gene regulatory networks by linking open chromatin regions with gene expression profiles at single cell resolution. Easily interpret epigenetic profiles with key expression markers. \u2022 Efficiently&#8230;<\/p>\n<div><a class=\"more-link\" href=\"https:\/\/nwgc.gs.washington.edu\/wordpress\/tech-platforms\/sample-processing\/short-read\/10x-scrnaseq-and-atacseq\/\">Continue reading <span class=\"screen-reader-text\">10x scRNAseq and ATACseq<\/span><\/a><\/div>\n","protected":false},"author":2,"featured_media":0,"parent":293,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-345","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/pages\/345","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/comments?post=345"}],"version-history":[{"count":0,"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/pages\/345\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/pages\/293"}],"wp:attachment":[{"href":"https:\/\/nwgc.gs.washington.edu\/wordpress\/wp-json\/wp\/v2\/media?parent=345"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}